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Use the PopSet (population study data sets) in ENTREZ to retrieve coding sequence (CDS) of amylase-related...

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Biology

Use the PopSet (population study data sets) in ENTREZ toretrieve coding sequence (CDS) of amylase-related gene (amyrel)generated for Drosophila yakuba by Cariou et al. (2001). You shouldretrieve 5 Drosophila yakuba sequences from different populationstrains. ***Make sure all your sequences are Drosophilayakuba.***

(a) Report the GenBank accession numbers.

(b) Align coding regions of the 5 sequences. Which alignmentsoftware did you use?

(c) Look at the first 200 bases of the alignment. Count thenumbers of segregating sites(K), the numbers of segregating sitesper sites (k), and nucleotide diversity (Ï€).

Answer & Explanation Solved by verified expert
3.9 Ratings (517 Votes)
Go to the site httpswwwncbinlmnihgovWebSearchentrezfshtml and select ENTREZ httpswwwncbinlmnihgovgquery and select PopSet Enter amyrel in the search column httpswwwncbinlmnihgovpopset12620152 this has Cariou et al 2001 amyrel sequences for different strains of Drosophila yakuba a 1 GenBank AF2808781 Drosophila yakuba strain LO4 2 GenBank AF2808771 Drosophila yakuba strain LBV2 clone 4 3 GenBank AF2808761 Drosophila yakuba strain LBV2 clone    See Answer
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